SMARCAD1, a novel human helicase family-defining member associated with genetic instability: Cloning, expression, and mapping to 4q22-q23, a band rich in breakpoints and deletion mutants involved in several human diseases

Chaker N. Adra, José Luiz Donato, Rachel Badovinac, Farzand Syed, Reshma Kheraj, Hongbo Cai, Colin Moran, Mitchell T. Kolker, Helen Turner, Stanislawa Weremowicz, Taro Shirakawa, Cynthia C. Morton, Lowell E. Schnipper, Reed Drews

Research output: Contribution to journalArticle

Abstract

Members of the DEAD/H box-containing helicase superfamily include proteins essential to genome replication, repair, and expression. We report here the cloning and initial characterization of a novel human member of this protein family, designated hHell (human helicase 1), now designated SBARCAD1 by HUGO. This DEAD/H box-containing molecule has seven highly conserved sequence regions that allow us to place it in the SNF2 family of the helicase superfamily. Uniquely, though, hHel1 contains two DEAD/H box motifs, a property not reported to be shared by any other SNF2 family members. This defines a new subfamily consisting of hHel1 and its homologues. In addition to these DEAD/H box/ATP-binding motifs, hHel1 has a putative nuclear localization signal and several regions that may mediate protein-protein interactions. Expression analysis indicates that hHel1 transcripts are ubiquitous, with particularly high levels in endocrine tissue. We have mapped the gene for hHel1 to human chromosome 4q22-q23; this region is rich in breakpoints and deletion mutants of genes involved in several human diseases, notably soft tissue leiomyosarcoma, hepatocellular carcinoma, and hematologic malignancies. Our observation that human Hell gene overexpression is present in an E1A-expressing cell line with increased capacity for gene reactivation events by genomic rearrangement suggests that human Hel1 may play a role in genetic instability development. (C) 2000 Academic Press.

Original languageEnglish (US)
Pages (from-to)162-173
Number of pages12
JournalGenomics
Volume69
Issue number2
DOIs
StatePublished - Oct 15 2000

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Organism Cloning
Proteins
Genes
Nuclear Localization Signals
Leiomyosarcoma
Conserved Sequence
Gene Deletion
Human Chromosomes
Hematologic Neoplasms
Hepatocellular Carcinoma
Adenosine Triphosphate
Genome
Cell Line

ASJC Scopus subject areas

  • Genetics

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SMARCAD1, a novel human helicase family-defining member associated with genetic instability : Cloning, expression, and mapping to 4q22-q23, a band rich in breakpoints and deletion mutants involved in several human diseases. / Adra, Chaker N.; Donato, José Luiz; Badovinac, Rachel; Syed, Farzand; Kheraj, Reshma; Cai, Hongbo; Moran, Colin; Kolker, Mitchell T.; Turner, Helen; Weremowicz, Stanislawa; Shirakawa, Taro; Morton, Cynthia C.; Schnipper, Lowell E.; Drews, Reed.

In: Genomics, Vol. 69, No. 2, 15.10.2000, p. 162-173.

Research output: Contribution to journalArticle

Adra, CN, Donato, JL, Badovinac, R, Syed, F, Kheraj, R, Cai, H, Moran, C, Kolker, MT, Turner, H, Weremowicz, S, Shirakawa, T, Morton, CC, Schnipper, LE & Drews, R 2000, 'SMARCAD1, a novel human helicase family-defining member associated with genetic instability: Cloning, expression, and mapping to 4q22-q23, a band rich in breakpoints and deletion mutants involved in several human diseases', Genomics, vol. 69, no. 2, pp. 162-173. https://doi.org/10.1006/geno.2000.6281
Adra, Chaker N. ; Donato, José Luiz ; Badovinac, Rachel ; Syed, Farzand ; Kheraj, Reshma ; Cai, Hongbo ; Moran, Colin ; Kolker, Mitchell T. ; Turner, Helen ; Weremowicz, Stanislawa ; Shirakawa, Taro ; Morton, Cynthia C. ; Schnipper, Lowell E. ; Drews, Reed. / SMARCAD1, a novel human helicase family-defining member associated with genetic instability : Cloning, expression, and mapping to 4q22-q23, a band rich in breakpoints and deletion mutants involved in several human diseases. In: Genomics. 2000 ; Vol. 69, No. 2. pp. 162-173.
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AU - Adra, Chaker N.

AU - Donato, José Luiz

AU - Badovinac, Rachel

AU - Syed, Farzand

AU - Kheraj, Reshma

AU - Cai, Hongbo

AU - Moran, Colin

AU - Kolker, Mitchell T.

AU - Turner, Helen

AU - Weremowicz, Stanislawa

AU - Shirakawa, Taro

AU - Morton, Cynthia C.

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