FUGOID: Functional genomics of organellar introns database

Fei Li, David L. Herrin

Research output: Contribution to journalArticle

Abstract

FUGOID is a web-based, taxonomically broad organelle intron database that collects and integrates various functional and structural data on organellar (mitochondrial and chloroplast) introns. The main information provided by FUGOID includes intron sequence, subclass, resident ORF, self-splicing capability, host gene, protein factor(s) involved in splicing, mobility, insertion site, twintron, seminal references and taxonomic position of host organism. It is implemented in a relational database management system, allowing sophisticated, user-friendly searching, data entry and revision. Users can access the database by any common web browser using a variety of operating systems. The main page of the database is available at http://wnt.cc.utexas.edu/~ifmr530/introndata/main.htm.

Original languageEnglish (US)
Pages (from-to)385-386
Number of pages2
JournalNucleic Acids Research
Volume30
Issue number1
StatePublished - Jan 1 2002

Fingerprint

Genomics
Introns
Databases
Integration Host Factors
Database Management Systems
Web Browser
Chloroplasts
Organelles
Open Reading Frames
Proteins

ASJC Scopus subject areas

  • Genetics

Cite this

FUGOID : Functional genomics of organellar introns database. / Li, Fei; Herrin, David L.

In: Nucleic Acids Research, Vol. 30, No. 1, 01.01.2002, p. 385-386.

Research output: Contribution to journalArticle

Li, Fei ; Herrin, David L. / FUGOID : Functional genomics of organellar introns database. In: Nucleic Acids Research. 2002 ; Vol. 30, No. 1. pp. 385-386.
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