Algebraic systems biology

Theses and hypotheses

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Abstract

What is systems biology? What can biologists gain from an attempt to algebraize the questions in systems biology? Starting with plausible biological theses, can one algebraically model them and then manipulate them to suggest meaningful hypotheses? Using these hypotheses, can one measure and mine suitable experimental data to validate or refute these hypotheses? Through these intertwined processes of measuring, mining, modeling and manipulating biological systems, can one generate the set of theses and hypotheses upon which systems biology will be founded? This review provides one algorithmic-algebraist's somewhat idiosyncratic response to these and other related questions, but also aims to persuade young algebraists to examine the possible role they and algebra can play to enrich this subject.

Original languageEnglish (US)
Title of host publicationAlgebraic Biology - Second International Conference, AB 2007, Proceedings
Pages1-14
Number of pages14
Volume4545 LNCS
StatePublished - 2007
Event2nd International Conference on Algebraic Biology, AB 2007 - Castle of Hagenberg, Austria
Duration: Jul 2 2007Jul 4 2007

Publication series

NameLecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics)
Volume4545 LNCS
ISSN (Print)03029743
ISSN (Electronic)16113349

Other

Other2nd International Conference on Algebraic Biology, AB 2007
CountryAustria
CityCastle of Hagenberg
Period7/2/077/4/07

Fingerprint

Systems Biology
Algebraist
Biological systems
Algebra
Biological Systems
Mining
Experimental Data
Modeling
Model

ASJC Scopus subject areas

  • Computer Science(all)
  • Biochemistry, Genetics and Molecular Biology(all)
  • Theoretical Computer Science

Cite this

Mishra, B. (2007). Algebraic systems biology: Theses and hypotheses. In Algebraic Biology - Second International Conference, AB 2007, Proceedings (Vol. 4545 LNCS, pp. 1-14). (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); Vol. 4545 LNCS).

Algebraic systems biology : Theses and hypotheses. / Mishra, Bhubaneswar.

Algebraic Biology - Second International Conference, AB 2007, Proceedings. Vol. 4545 LNCS 2007. p. 1-14 (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); Vol. 4545 LNCS).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Mishra, B 2007, Algebraic systems biology: Theses and hypotheses. in Algebraic Biology - Second International Conference, AB 2007, Proceedings. vol. 4545 LNCS, Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics), vol. 4545 LNCS, pp. 1-14, 2nd International Conference on Algebraic Biology, AB 2007, Castle of Hagenberg, Austria, 7/2/07.
Mishra B. Algebraic systems biology: Theses and hypotheses. In Algebraic Biology - Second International Conference, AB 2007, Proceedings. Vol. 4545 LNCS. 2007. p. 1-14. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics)).
Mishra, Bhubaneswar. / Algebraic systems biology : Theses and hypotheses. Algebraic Biology - Second International Conference, AB 2007, Proceedings. Vol. 4545 LNCS 2007. pp. 1-14 (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics)).
@inproceedings{e375a41847984f779a50d3d102478d23,
title = "Algebraic systems biology: Theses and hypotheses",
abstract = "What is systems biology? What can biologists gain from an attempt to algebraize the questions in systems biology? Starting with plausible biological theses, can one algebraically model them and then manipulate them to suggest meaningful hypotheses? Using these hypotheses, can one measure and mine suitable experimental data to validate or refute these hypotheses? Through these intertwined processes of measuring, mining, modeling and manipulating biological systems, can one generate the set of theses and hypotheses upon which systems biology will be founded? This review provides one algorithmic-algebraist's somewhat idiosyncratic response to these and other related questions, but also aims to persuade young algebraists to examine the possible role they and algebra can play to enrich this subject.",
author = "Bhubaneswar Mishra",
year = "2007",
language = "English (US)",
isbn = "9783540734321",
volume = "4545 LNCS",
series = "Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics)",
pages = "1--14",
booktitle = "Algebraic Biology - Second International Conference, AB 2007, Proceedings",

}

TY - GEN

T1 - Algebraic systems biology

T2 - Theses and hypotheses

AU - Mishra, Bhubaneswar

PY - 2007

Y1 - 2007

N2 - What is systems biology? What can biologists gain from an attempt to algebraize the questions in systems biology? Starting with plausible biological theses, can one algebraically model them and then manipulate them to suggest meaningful hypotheses? Using these hypotheses, can one measure and mine suitable experimental data to validate or refute these hypotheses? Through these intertwined processes of measuring, mining, modeling and manipulating biological systems, can one generate the set of theses and hypotheses upon which systems biology will be founded? This review provides one algorithmic-algebraist's somewhat idiosyncratic response to these and other related questions, but also aims to persuade young algebraists to examine the possible role they and algebra can play to enrich this subject.

AB - What is systems biology? What can biologists gain from an attempt to algebraize the questions in systems biology? Starting with plausible biological theses, can one algebraically model them and then manipulate them to suggest meaningful hypotheses? Using these hypotheses, can one measure and mine suitable experimental data to validate or refute these hypotheses? Through these intertwined processes of measuring, mining, modeling and manipulating biological systems, can one generate the set of theses and hypotheses upon which systems biology will be founded? This review provides one algorithmic-algebraist's somewhat idiosyncratic response to these and other related questions, but also aims to persuade young algebraists to examine the possible role they and algebra can play to enrich this subject.

UR - http://www.scopus.com/inward/record.url?scp=38149011498&partnerID=8YFLogxK

UR - http://www.scopus.com/inward/citedby.url?scp=38149011498&partnerID=8YFLogxK

M3 - Conference contribution

SN - 9783540734321

VL - 4545 LNCS

T3 - Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics)

SP - 1

EP - 14

BT - Algebraic Biology - Second International Conference, AB 2007, Proceedings

ER -