Tamar Schlick

Professor of Chemistry, Math and Computer Science

1981 …2019
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Fingerprint Dive into the research topics where Tamar Schlick is active. These topic labels come from the works of this person. Together they form a unique fingerprint.

RNA Medicine & Life Sciences
DNA-Directed DNA Polymerase Medicine & Life Sciences
DNA Medicine & Life Sciences
Chromatin Medicine & Life Sciences
Nucleotides Medicine & Life Sciences
Nucleosomes Medicine & Life Sciences
Catalytic Domain Medicine & Life Sciences
Histones Medicine & Life Sciences

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Research Output 1981 2019

An extended dual graph library and partitioning algorithm applicable to pseudoknotted RNA structures

Jain, S., Saju, S., Petingi, L. & Schlick, T., Jan 1 2019, In : Methods.

Research output: Contribution to journalArticle

Libraries
RNA
Topology
Nucleic Acid Databases
Graph theory
Molecular Modeling
chromatin
Molecular modeling
Chromatin
Nucleosomes

Graph-Theoretic Partitioning of RNAs and Classification of Pseudoknots

Petingi, L. & Schlick, T., Jan 1 2019, Algorithms for Computational Biology - 6th International Conference, AlCoB 2019, Proceedings. Vega-Rodríguez, M. A., Holmes, I. & Martín-Vide, C. (eds.). Springer-Verlag, p. 68-79 12 p. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); vol. 11488 LNBI).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Dual Graph
RNA
Partitioning
Fragment
Graph in graph theory

Mesoscale modeling reveals formation of an epigenetically driven HOXC gene hub

Bascom, G. D., Myers, C. G. & Schlick, T., Jan 1 2019, In : Proceedings of the National Academy of Sciences of the United States of America. 116, 11, p. 4955-4962 8 p.

Research output: Contribution to journalArticle

Histones
Nucleosomes
Acetylation
Genes
Multigene Family

Scaling molecular dynamics beyond 100,000 processor cores for large-scale biophysical simulations

Jung, J., Nishima, W., Daniels, M., Bascom, G., Kobayashi, C., Adedoyin, A., Wall, M., Lappala, A., Phillips, D., Fischer, W., Tung, C. S., Schlick, T., Sugita, Y. & Sanbonmatsu, K. Y., Jan 1 2019, In : Journal of Computational Chemistry.

Research output: Contribution to journalArticle

Molecular Dynamics
Molecular dynamics
Scaling
Data storage equipment
Atoms