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Research Output 2009 2019

  • 15 Conference contribution
  • 8 Article
  • 2 Conference article
2019

Bistability requires better balanced toggle switches in the presence of competition for shared cellular resources

Gyorgy, A., Jul 1 2019, 2019 American Control Conference, ACC 2019. Institute of Electrical and Electronics Engineers Inc., p. 1541-1546 6 p. 8815350. (Proceedings of the American Control Conference; vol. 2019-July).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Switches
Scalability
Large scale systems
Availability
Networks (circuits)

Optimal Experiment Design and Leveraging Competition for Shared Resources in Cell-Free Extracts

Halter, W., Allgöwer, F., Murray, R. M. & Gyorgy, A., Jan 18 2019, 2018 IEEE Conference on Decision and Control, CDC 2018. Institute of Electrical and Electronics Engineers Inc., p. 1872-1879 8 p. 8619039. (Proceedings of the IEEE Conference on Decision and Control; vol. 2018-December).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Resources
Cell
Synthetic Biology
Experiment
Experiments

Sharing resources can lead to monostability in a network of bistable toggle switches

Gyorgy, A., Apr 1 2019, In : IEEE Control Systems Letters. 3, 2, 8467997.

Research output: Contribution to journalArticle

Resource Sharing
Switch
Switches
Synthetic Biology
Modular Design
2018

Pattern Formation over Multigraphs

Gyorgy, A. & Arcak, M., Jan 1 2018, In : IEEE Transactions on Network Science and Engineering. 5, 1, p. 55-64 10 p.

Research output: Contribution to journalArticle

System theory
Cells
Neural networks
2017

Pattern Formation in Large-Scale Networks with Asymmetric Connections

Gyorgy, A. & Arcak, M., Jul 1 2017, In : IFAC-PapersOnLine. 50, 1, p. 10944-10949 6 p.

Research output: Contribution to journalArticle

Directed graphs
System theory
Cells
Neural networks
2016

Creating Single-Copy Genetic Circuits

Lee, J. W., Gyorgy, A., Cameron, D. E., Pyenson, N., Choi, K. R., Way, J. C., Silver, P. A., Del Vecchio, D. & Collins, J. J., Jul 21 2016, In : Molecular Cell. 63, 2, p. 329-336 8 p.

Research output: Contribution to journalArticle

Synthetic Biology
Equipment and Supplies
Gene Regulatory Networks
Plasmids
Genome

Quantifying resource competition and its effects in the TX-TL system

Gyorgy, A. & Murray, R. M., Dec 27 2016, 2016 IEEE 55th Conference on Decision and Control, CDC 2016. Institute of Electrical and Electronics Engineers Inc., p. 3363-3368 6 p. 7798775

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Resources
Gene expression
Gene Expression
Experimental Data
Circuit Design
2015

Bounding the effect of retroactivity in the presence of parameter uncertainty

Prescott, T. P. & Gyorgy, A., Jul 28 2015, ACC 2015 - 2015 American Control Conference. Institute of Electrical and Electronics Engineers Inc., Vol. 2015-July. p. 3120-3125 6 p. 7171812

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Trajectories
Genes
Uncertainty

Isocost Lines Describe the Cellular Economy of Genetic Circuits

Gyorgy, A., Jiménez, J. I., Yazbek, J., Huang, H. H., Chung, H., Weiss, R. & Del Vecchio, D., Aug 6 2015, In : Biophysical Journal. 109, 3, p. 639-646 8 p.

Research output: Contribution to journalArticle

Plasmids
Ribosomes
Reporter Genes
Genes
Libraries

Simplexes characterize the coupling in gene expression due to competition for rnap and ribosomes

Gyorgy, A. & Del Vecchio, D., Jan 1 2015, Synthetic Biology: Engineering, Evolution, and Design Conference 2015, SEED 2015. AIChE, Vol. 2. 1 p.

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Ribosomes
Gene expression
Gene Expression
2014

Analyzing a novel model of human blood glucose system at molecular levels

Kovacs, L., Gyorgy, A., Almassy, Z. & Benyo, Z., Mar 26 2014, 2009 European Control Conference, ECC 2009. Institute of Electrical and Electronics Engineers Inc., p. 2494-2499 6 p. 7074780

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Glucose
Blood
Nonlinear analysis
Medical problems
Linearization

Limitations and trade-offs in gene expression due to competition for shared cellular resources

Gyorgy, A. & Del Vecchio, D., Jan 1 2014, In : Proceedings of the IEEE Conference on Decision and Control. 2015-February, February, p. 5431-5436 6 p., 7040238.

Research output: Contribution to journalConference article

Gene expression
Gene Expression
Trade-offs
Proteins
Protein

Modular Composition of Gene Transcription Networks

Gyorgy, A. & Del Vecchio, D., Jan 1 2014, In : PLoS Computational Biology. 10, 3, e1003486.

Research output: Contribution to journalArticle

Synthetic Biology
Systems Biology
Gene Regulatory Networks
Transcription
Homeostasis

Motion planning algorithms for tactical actions in robot soccer

Gyorgy, A. & Harmati, I., Mar 26 2014, 2009 European Control Conference, ECC 2009. Institute of Electrical and Electronics Engineers Inc., p. 4445-4450 6 p. 7075100

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Motion planning
Robots
Collision avoidance
Artificial intelligence
Learning systems
2013

How slaves affect a master module in gene transcription networks

Gyorgy, A. & Del Vecchio, D., Jan 1 2013, 2013 IEEE 52nd Annual Conference on Decision and Control, CDC 2013. Institute of Electrical and Electronics Engineers Inc., p. 6561-6567 7 p. 6760927

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Transcription
Genes
Gene
Module
Trajectories
2012

Retroactivity to the input in complex gene transcription networks

Gyorgy, A. & Del Vecchio, D., Dec 1 2012, In : Proceedings of the IEEE Conference on Decision and Control. p. 3595-3601 7 p., 6426160.

Research output: Contribution to journalConference article

Transcription
Genes
Gene
Module
Networks (circuits)
2011

Quasi-model-based control of type 1 diabetes mellitus

Gyorgy, A., Kovács, L., Szalay, P., Drexler, D. A., Beny, B. & Beny, Z., Dec 1 2011, In : Journal of Electrical and Computer Engineering. 728540.

Research output: Contribution to journalArticle

Medical problems
Insulin
Glucose
Control theory
Controllers

Quasi model based optimal control of type 1 diabetes mellitus

Kovács, L., Gyorgy, A., Szalay, P., Drexler, D. A., Benyó, B. & Benyó, Z., Dec 1 2011, Proceedings of the 18th IFAC World Congress. PART 1 ed. Vol. 18. p. 5012-5017 6 p.

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Medical problems
Controllers
Insulin
Glucose
Control theory

Robust servo control of a novel type 1 diabetic model

Kovács, L., Kulcsár, B., Gyorgy, A. & Benyõ, Z., Mar 1 2011, In : Optimal Control Applications and Methods. 32, 2, p. 215-238 24 p.

Research output: Contribution to journalArticle

Glucose
Insulin
Closed-loop
Structured Singular Value
Diabetes Mellitus
2010

ANFIS regulated type 1diabetic model for different glucose absorption scenarios

Gyorgy, A., Szalay, P., Benyó, Z., Benyó, B., Kovács, A. & Kovács, L., Jul 26 2010, INES 2010 - 14th International Conference on Intelligent Engineering Systems, Proceedings. p. 327-332 6 p. 5483822

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Fuzzy inference
Glucose
Blood
Controllers
Soft computing

Application of neural networks in mine detection

Gyorgy, A., Puspoki, Z., Barbarics, T. & Padanyi, J., Dec 1 2010, Mobile Robotics: Solutions and Challenges - Proceedings of the 12th International Conference on Climbing and Walking Robots and the Support Technologies for Mobile Machines, CLAWAR 2009. p. 389-396 8 p.

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Intelligent robots
Pattern recognition
Neural networks

Investigating the applicability of qALPV modeling to ICU models for glycaemic control

Kovàcs, L., Gyorgy, A., Szalay, P., Benyó, B., Benyó, Z., Hann, C. E. & Chase, J. G., Dec 1 2010, UKACC International Conference on CONTROL 2010. 4 ed. Vol. 2010. p. 577-582 6 p. 0346

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Intensive care units
Insulin
Nonlinear analysis
Control theory
Glucose

Robust control of type 1 diabetes using μ-synthesis

Kovács, L., Gyorgy, A., Kulcsár, B., Szalay, P., Benyó, B. & Benyó, Z., Dec 1 2010, UKACC International Conference on CONTROL 2010. 4 ed. Vol. 2010. p. 571-576 6 p. 0345

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Medical problems
Robust control
Glucose
Insulin
Sensitivity analysis
2009

Soft computing control of Type 1 diabetes described at molecular levels

Kovács, L., Gyorgy, A., Benyó, B., Benyó, Z. & Kovács, A., Oct 27 2009, Proceedings - 2009 5th International Symposium on Applied Computational Intelligence and Informatics, SACI 2009. p. 99-104 6 p. 5136220

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Soft computing
Medical problems
Glucose
Blood
Insulin

Type 1 diabetes regulated by ANFIS at molecular levels

Kovács, L., Gyorgy, A., Benyó, B. & Kovács, A., Dec 1 2009, World Congress on Medical Physics and Biomedical Engineering: Image Processing, Biosignal Processing, Modelling and Simulation, Biomechanics. 4 ed. Vol. 25. p. 841-844 4 p.

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Soft computing
Fuzzy inference
Medical problems
Glucose
Blood Glucose