Research Output 1960 2019

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Chapter (peer-reviewed)

Investigation of deactivation of co-salen catalysts in the hydrolytic kinetic resolution of epichlorohydrin

Jain, S., Zheng, X., Venkatasubbaiah, K., Jones, C. W., Weck, M. & Davis, R. J., 2009, Catalysis of organic reactions. Prunier, M. L. (ed.). Boca Raton: CRC Press, p. 389-398 ISBN 978-2-4200-7076-7

Research output: Chapter in Book/Report/Conference proceedingChapter (peer-reviewed)

Liquid fuel and chemicals from cellulosic residues by acid hydrolysis

Rugg, B., Armstrong, P. & Dreiblatt, A., 1982, Fuels and organic chemicals from biomass. Wise, D. I. (ed.). Cambridge, MA: Dynatech R&D Company

Research output: Chapter in Book/Report/Conference proceedingChapter (peer-reviewed)

Low cost alcohol from waste cellulose

Rugg, B., 1980, Yearbook of Science and Technology. NYU/DAS 80-08

Research output: Chapter in Book/Report/Conference proceedingChapter (peer-reviewed)

Mathematical frontiers in computational chemical physics

Kouri, DJ., Sun, Y., Mowrey, RC., Zhang, J., Truhlar, D. G., Haug, K. & Schwenke, D. W., 1988, Proceedings of the Workshop on Atomic and Molecular Structure and Dynamics. Truhlar, DG. (ed.). New York: Springer, p. 207-243

Research output: Chapter in Book/Report/Conference proceedingChapter (peer-reviewed)

Mathematical optimization

Schlick, T. & Parks, G., 1994, DOE computational sciences education project (e-book): http://csep1.phy.ornl.gov/csep.html.

Research output: Chapter in Book/Report/Conference proceedingChapter (peer-reviewed)

Meso-scale self-assembly

Gracias, D. H., Choi, I. S., Weck, M. & Whitesides, G., 2001, New directions in algorithms and computational robotics. Donald, B., Lynch, K. & Rus, D. (eds.). A.K. Peters

Research output: Chapter in Book/Report/Conference proceedingChapter (peer-reviewed)

Metal template control of self-assembly in supramolecular chemistry

Fredericks, J. & Hamilton, A., 1996, Perspectives in supramolecular chemistry. John Wiley and Sons, Vol. 3. p. 1-39

Research output: Chapter in Book/Report/Conference proceedingChapter (peer-reviewed)

MIND3: A FORTRAN Patterson superposition program for the IBM 1130

Seeman, N., 1970, Crystallographic computing. Ahmed, F. R. (ed.). Copenhagen: Munksgaard, p. 87-89

Research output: Chapter in Book/Report/Conference proceedingChapter (peer-reviewed)

Molecular engineering of crystals by electrostatic templating

Fagan, PJ. & Ward, M., 1995, Perspectives in supramolecular chemistry. Desiraju, GR. (ed.). New York: John Wiley

Research output: Chapter in Book/Report/Conference proceedingChapter (peer-reviewed)

Molecular genetics: Daedalus revisited

Kallenbach, N., 1973, Medicine and society, 1972: Four symposia in current problems. Philadelphia, PA: American Philosophical Society, Library Publication, Vol. 5. p. 102-108

Research output: Chapter in Book/Report/Conference proceedingChapter (peer-reviewed)

Molecular recognition: Synthetic approaches to artificial receptors

Fan, E. & Hamilton, A., 1999, Crystal engineering. Seddon, K. & Zaworotko, M. (eds.). Kluwer, Vol. 539. p. 357-369

Research output: Chapter in Book/Report/Conference proceedingChapter (peer-reviewed)

Molecular recognition by macrocyclic receptors

Hamilton, A., 1990, Inclusion phenomena and molecular recognition. Atwood, J. L. (ed.). New York: Plenum Press, p. 57-64

Research output: Chapter in Book/Report/Conference proceedingChapter (peer-reviewed)

Molecular self-assembly of hydrogen-bonded crystalline networks

Russell, V. A. & Ward, M., 1997, Proceedings of the NATO Advanced Research Workshop on Modular Chemistry (held September 9 - 12 1995. Estes Park, Colorado). Michl, J. (ed.). Boston: Kluwer, p. 397

Research output: Chapter in Book/Report/Conference proceedingChapter (peer-reviewed)

Nanoscale assembly and manipulation of branched DNA: A biological starting point for nanotechnology

Seeman, N., 1989, NANOCON Proceedings. Lewis, J. & Quel, J. L. (eds.). Bellevue, WA: NANOCON, p. 101-123

Research output: Chapter in Book/Report/Conference proceedingChapter (peer-reviewed)

Nicks, nodes, and new motifs for DNA nanotechnology

Seeman, N., Mao, C., Liu, F., Sha, R., Yang, X., Wenzler, L. A., Li, X., Shen, Z., Yan, H., Sa-Ardyen, P., Zhang, X., Shen, W., Birac, J. J., Lukeman, P. S., Pinto, Y., Qi, J., Liu, B., Qiu, H., Du, S. M., Wang, H. & 6 others, Sun, W., Wang, Y., Fu, T. J., Zhang, Y., Mueller, J. E. & Chen, J., 2000, Frontiers of nano-optoelectronic systems. Pavesi, L. & Buzanova, E. (eds.). Dordrecht: Kluwer, p. 177-198

Research output: Chapter in Book/Report/Conference proceedingChapter (peer-reviewed)

Nucleation and growth of molecular crystals on molecular interfaces

Carter, PW., Frostman, LM., Hillier, AC. & Ward, M., 1994, ACS Symposium Series. Vol. 561.

Research output: Chapter in Book/Report/Conference proceedingChapter (peer-reviewed)

Nucleic acid junctions: Building blocks for genetic engineering in three dimensions

Seeman, N., 1981, Biomolecular stereodynamics. Sarma, R. H. (ed.). New York: Adenine Press, p. 269-277

Research output: Chapter in Book/Report/Conference proceedingChapter (peer-reviewed)

Nucleic acid junctions: A successful experiment in macromolecular design

Seeman, N. & Kallenbach, N., 1988, Molecular structure: Chemical reactivity and biological activity.

Research output: Chapter in Book/Report/Conference proceedingChapter (peer-reviewed)

Nucleotide recognition by macrocyclic receptors

Hamilton, A., Muehldorf, A., Chang, S. K., Pant, N., Goswami, S. & Van Engen, D., 1989, Advances in inclusion chemistry. Gokel, G. & Koga, K. (eds.). Amsterdam: Kluwer

Research output: Chapter in Book/Report/Conference proceedingChapter (peer-reviewed)

On the use of immobilized metal complex catalysts in organic synthesis

Jones, C. W., Holbach, M., Richardson, J. M., Sommer, W. J., Weck, M., Yu, K. & Zheng, X., 2007, Catalysis of organic reactions. Schmidt, S. R. (ed.). Boca Raton, London, New York: CRC Press, p. 3-12 ISBN 0-8493-7557-6

Research output: Chapter in Book/Report/Conference proceedingChapter (peer-reviewed)

Optical consequences of dynamic processes at crystal inferfaces

Kahr, B., Kurimoto, M., Kaminsky, W., Jang, S. H. & Benedict, J., 2004, Nanocale structure and assembly of solid-fluid interfaces. Liu, X. Y. & De Yoreo, J. (eds.). Kluwer, Dordrecht

Research output: Chapter in Book/Report/Conference proceedingChapter (peer-reviewed)

Optimization methods in computational chemistry

Schlick, T., 1992, Reviews in Computational Chemistry. Lipkowitz, K. B. & Boyd, D. B. (eds.). New York: VCH Publishers, Vol. 3. p. 1-71 Chapter 1

Research output: Chapter in Book/Report/Conference proceedingChapter (peer-reviewed)

Organogelators: New supramolecular materials

Melendez, R. & Hamilton, A., 2002, Encyclopedia of smart materials. Biderman, A. (ed.). New York: Wiley, p. 472

Research output: Chapter in Book/Report/Conference proceedingChapter (peer-reviewed)

Oxidation adjacent to C=X bonds by dehydration

Shannon, S. & Diao, T., 2014, Comprehensive organic synthesis II. Knochel, P. & Molander, G. A. (eds.). Elsevier Comp. Org. Synth., Vol. 7. p. 178-212

Research output: Chapter in Book/Report/Conference proceedingChapter (peer-reviewed)

Peptidomimetic-based inhibitors of farnesyltransferase

Knowles, D. B., Rosenberg, S., Sebti, S. M. & Hamilton, A., 2000, Farnesyltransferase as a target in anti-cancer drug design. Sebti, S. M. & Hamilton, A. D. (eds.). Humana Press, p. 49

Research output: Chapter in Book/Report/Conference proceedingChapter (peer-reviewed)

Peptidomimetic inhibitors of farnesyltransferase: An approach to new antitumor agents

Qian, Y., Sebti, S. M. & Hamilton, A., 1997, Advances in peptidomimetic chemistry. Abell, A. (ed.). JAI Press, Vol. 1. p. 165-192

Research output: Chapter in Book/Report/Conference proceedingChapter (peer-reviewed)

Photodissociation of HF in ArnHF (n=1-14,54)

Schroder, T., Schinke, R., Liu, S., Bacic, Z. & Moskowitz, W., 1996, Femtochemistry . Chergui, M. (ed.). Singapore: World Scientific, p. 277-280

Research output: Chapter in Book/Report/Conference proceedingChapter (peer-reviewed)

Prenyltransferase inhibitors as radiosensitizers

Bernhard, E. J., Muschel, R. J., Cohen-Jonathan, E., Favre, G., Hamilton, A. & Sebti, S. M., 2000, Farnesyltransferase as a target in anti-cancer drug design. Hamilton, A. D. & Sebti, S. M. (eds.). Humana Press, p. 171

Research output: Chapter in Book/Report/Conference proceedingChapter (peer-reviewed)

Principles and applications of the electrochemical quartz crystal microbalance

Ward, M., 1995, Monographs in electroanalytical chemistry and electrochemistry: Physical electrochemistry, principles, methods, and applications. Rubinstein, I. (ed.). New York: Marcel Dekker

Research output: Chapter in Book/Report/Conference proceedingChapter (peer-reviewed)

Protein prenylation in trypanosomatids: A new piggy-back medicinal chemistry target for the development of agents against tropical diseases

Gelb, M. J., Buckner, F. S., Yokoyama, K., Ohkanda, J., Hamilton, A., Nguyen, L., Sebti, S. M. & Van Voorhis, W. C., 2000, Drugs against parasitic diseases. France, 2000

Research output: Chapter in Book/Report/Conference proceedingChapter (peer-reviewed)

Protein prenylation in trypanosomatids: A new piggy-back medicinal chemistry target for the development of agents against tropical diseases

Gelb, M. J., Buckner, F. S., Yokoyama, K., Ohkanda, J., Hamilton, A., Nguyen, L., Rossi-Bergmann, B., Stuart, K. D., Sebti, S. M. & Van Voorhis, W. C., 2000, Farnesyltransferase as a target in anti-cancer drug design. Sebti, S. M. & Hamilton, A. D. (eds.). Humana Press, p. 221

Research output: Chapter in Book/Report/Conference proceedingChapter (peer-reviewed)

Protein recognition of base pairs in a double helix

Rich, A., Seeman, N. & Rosenberg, J. M., 1977, Nucleic acid-protein recognition. Vogel, H. G. (ed.). New York: Academic Press, p. 361-374

Research output: Chapter in Book/Report/Conference proceedingChapter (peer-reviewed)

Protein secondary structure mimetics as modulators of protein-protein and protein-ligand interactions

Hamilton, A., 2005, First reference of chemical biology. Schreiber, S., Kapoor, T. & Wess, G. (eds.). Wiley-VCH

Research output: Chapter in Book/Report/Conference proceedingChapter (peer-reviewed)

Protein surface recognition

Salvatella, X., Haack, T., Gairí, M., De Mendoza, J., Peczuh, M. W., Hamilton, A. & Giralt, E., 1999, Protein surface recognition. Pons, M. (ed.). Kluwer, Vol. 526. p. 267-280

Research output: Chapter in Book/Report/Conference proceedingChapter (peer-reviewed)

Protein surface recognition by synthetic receptors

Lin, Q., Park, H. S., Hamuro, Y. & Hamilton, A., 1999, Supramolecular chemistry: Where it is and where it is going. Urgaro, R. (ed.). Amsterdam: Kluwer, Vol. 527. p. 197-204

Research output: Chapter in Book/Report/Conference proceedingChapter (peer-reviewed)

Pursuing Laplace's vision on modern computers

Schlick, T., 1996, Proceedings of the IMA program in mathematical biology. Mesirov, J., Schulten, K. & Sumners, D. W. (eds.). New York: Springer-Verlag, p. 219-247 (IMA Volumes in Mathematics and its Applications; vol. 82).

Research output: Chapter in Book/Report/Conference proceedingChapter (peer-reviewed)

Resonance phenomena in quantal reactive infinite-order sudden calculations

Zhang, J., Abusalbi, N., Baer, M., Kouri, DJ. & Jellinek, J., 1984, ACS symposium series. American Chemical Society, Vol. 263. Chapter 24. p. 457-477

Research output: Chapter in Book/Report/Conference proceedingChapter (peer-reviewed)

RNA double helices at atomic resolution

Rich, A. & Seeman, N., 1976, Handbook of biochemistry and molecular biology. Fasman, G. (ed.). 3rd ed. Cleveland: CRC Press, Vol. II. p. 463-469

Research output: Chapter in Book/Report/Conference proceedingChapter (peer-reviewed)

Role of the peptide bond in protein structure and folding

Kallenbach, N., Bell, A. J. & Spek, E. J., 2000, The amide linkage. Greenberg, A., Breneman, C. M. & Liebman, J. F. (eds.). Wiley-Interscience, p. 599-625

Research output: Chapter in Book/Report/Conference proceedingChapter (peer-reviewed)

Scanning tunneling and atomic force microscopy of electrochemical interfaces

Ward, M. D. & White, H. S., 1996, Modern techniques in electroanalysis. Vanysek, P. (ed.). New York: Wiley, Vol. 139. p. 107-149 43 p.

Research output: Chapter in Book/Report/Conference proceedingChapter (peer-reviewed)

Atomic force microscopy
Scanning

Search strategies, minimization algorithms, and molecular dynamics simulations for exploring conformational spaces of nuclear acids

Overton, M., Schlick, T., Hingerty, B. E., Peskin, C. & Broyde, S., 1990, Theoretical biochemistry and molecular biophysics, Volume 1: DNA. Beveridge, D. L. & Lavery, R. (eds.). Guilderland, New York: Adenine Press, p. 39-58

Research output: Chapter in Book/Report/Conference proceedingChapter (peer-reviewed)

Self-assembling structures based on hydrogen bonding subunits

Zafar, A. & Hamilton, A., 1999, Problems in the synthesis and characterization of large molecular assemblies. Tsoucaris, G. (ed.). Kluwer, p. 67-85

Research output: Chapter in Book/Report/Conference proceedingChapter (peer-reviewed)

Self-assembly as a strategy for artificial receptor design

Linton, B., Goodman, M. S., Jubian, V. & Hamilton, A., 1996, Self-assembly in synthetic chemistry. Wuest, J. (ed.). Kluwer

Research output: Chapter in Book/Report/Conference proceedingChapter (peer-reviewed)

Simulation of double stranded branch point migration

Seeman, N. & Robinson, B. H., 1981, Biomolecular stereodynamics. Sarma, R. H. (ed.). New York: Adenine Press, p. 279-300

Research output: Chapter in Book/Report/Conference proceedingChapter (peer-reviewed)

Single crystal crystallography

Seeman, N., 1979, Stereodynamics of molecular systems. Sarma, R. H. (ed.). New York: Pergamon Press, p. 75-109

Research output: Chapter in Book/Report/Conference proceedingChapter (peer-reviewed)

Single crystal crystallography for nucleic acid structural studies

Seeman, N., 1980, Geometry and dynamics of nucleic acids. Sarma, R. H. (ed.). New York: Pergamon Press, p. 47-82

Research output: Chapter in Book/Report/Conference proceedingChapter (peer-reviewed)

Some failures and successes of long-timestep approaches to biomolecular simulations

Schlick, T., 1998, Algorithms for macromolecular modelling. Deuflhard, P., Hermans, J., Leimkuhler, B., Mark, A., Skeel, R. D. & Reich, S. (eds.). Springer-Verlag, p. 227-262 (Lecture Notes in Computational Science and Engineering; vol. 4).

Research output: Chapter in Book/Report/Conference proceedingChapter (peer-reviewed)

Stability of the helical nucleic acids

Kallenbach, N., 1974, Quantum statistical mechanics in the natural sciences. Kursunoglu, B., Mintz, S. L. & Windmayer, S. M. (eds.). New York: Plenum Press, p. 95-118

Research output: Chapter in Book/Report/Conference proceedingChapter (peer-reviewed)

Structural control and engineering of nucleic acids

Seeman, N., 1994, Concepts in protein engineering and design. Wrede, P. & Schneider, G. (eds.). Berlin: Walter-de-Gruyter, p. 319-343

Research output: Chapter in Book/Report/Conference proceedingChapter (peer-reviewed)

Structure, fluctuations and interactions of base pairs in nucleic acids monitored by NMR, tritium exchange and stopped-flow hydrogen-deuterium exchange measurements

Kallenbach, N., Mandal, C. & Englander, S. W., 1980, Nucleic acid geometry and dynamics. Sarma, R. H. (ed.). p. 233-251

Research output: Chapter in Book/Report/Conference proceedingChapter (peer-reviewed)