Research Output 1960 2019

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Chapter (peer-reviewed)
2015

Supramolecular polymers engineered via olefin metathesis

Elacqua, E., Ten Brummelhuis, N. & Weck, M., 2015, Handbook of metathesis. Grubbs (ed.). p. 71-92

Research output: Chapter in Book/Report/Conference proceedingChapter (peer-reviewed)

2014

Computational techniques for density functional based molecular dynamics calculations in plane-wave and localized basis sets

Tzanov, A. T. & Tuckerman, M., 2014, Many-electron approaches in physics, chemistry and mathematics. Berlin: Springer, p. 261-283

Research output: Chapter in Book/Report/Conference proceedingChapter (peer-reviewed)

Oxidation adjacent to C=X bonds by dehydration

Shannon, S. & Diao, T., 2014, Comprehensive organic synthesis II. Knochel, P. & Molander, G. A. (eds.). Elsevier Comp. Org. Synth., Vol. 7. p. 178-212

Research output: Chapter in Book/Report/Conference proceedingChapter (peer-reviewed)

2012

Designing a sustainable and stretchable "fox testicle" ice cream

Johnson, A., Kirshenbaum, K. & McBride, AE., 2012, The kitchen as laboratory. Vega, C., Ubbink, J. & van der Linden, E. (eds.). New York: Columbia University Press

Research output: Chapter in Book/Report/Conference proceedingChapter (peer-reviewed)

DNA crystals, constructs and devices

Seeman, N., Birktoft, J. J., Sha, R., Gu, H., Wang, T., Zheng, J., Chao, J., Constantinou, P. E., Ding, B. & Mao, C., 2012, Handbook of neuroscience, engineering and technology. Goddard III, W. A., Brenner, D. W., Lyshevski, S. E. & Iafrate, G. J. (eds.). 3rd ed. New York: CRC Press, p. 1037-1049

Research output: Chapter in Book/Report/Conference proceedingChapter (peer-reviewed)

Histories of crystallography by Shafranovskii and Schuh

Kahr, B. & Shtukenberg, A. G., 2012, Recent advances in crystallography. Benedict, J. B. (ed.). p. 1-34

Research output: Chapter in Book/Report/Conference proceedingChapter (peer-reviewed)

2009

Ab initio quantum mechanical/molecular mechanical studies of histone modifying enzymes

Zhang, Y., 2009, Multi-scale quantum models for biocatalysis: Modern techniques and applications. York, D. M. & Lee, T-S. (eds.). New York: Springer Verlag, p. 341-350

Research output: Chapter in Book/Report/Conference proceedingChapter (peer-reviewed)

Colourful world of dyeing crystals

Brustolon, M. & Kahr, B., 2009, The treasures of eureka. Electron paramagnetic resonance spectroscopy: From fundamental research to pioneering applications. Salikhov, K. M. (ed.). New Zealand: Axas Publishing

Research output: Chapter in Book/Report/Conference proceedingChapter (peer-reviewed)

Investigation of deactivation of co-salen catalysts in the hydrolytic kinetic resolution of epichlorohydrin

Jain, S., Zheng, X., Venkatasubbaiah, K., Jones, C. W., Weck, M. & Davis, R. J., 2009, Catalysis of organic reactions. Prunier, M. L. (ed.). Boca Raton: CRC Press, p. 389-398 ISBN 978-2-4200-7076-7

Research output: Chapter in Book/Report/Conference proceedingChapter (peer-reviewed)

Synthetic single-stranded DNA topology

Seeman, N., 2009, Applications of knot theory. Buck, D. & Flapan, E. (eds.). p. 121-153 (American Mathematical Society Proceedings of Symposia in Applied Mathematics; vol. 66).

Research output: Chapter in Book/Report/Conference proceedingChapter (peer-reviewed)

The perils of polynucleotides revisted

Seeman, N., 2009, Algorithmic processes. Condon, A., Harel, D., Kok, J. N., Salomaa, A. & Winfree, E. (eds.). Springer, p. 205-214

Research output: Chapter in Book/Report/Conference proceedingChapter (peer-reviewed)

2008

DNA nanoarchitectures, DNA nanotechnology, DNA nanotubes, DNA self-assembly

Seeman, N., 2008, Nucleic Acids from A to Z. Muller, S. (ed.). Weinheim: Wiley-VCH, p. 79-80; 81-82; 82; 86

Research output: Chapter in Book/Report/Conference proceedingChapter (peer-reviewed)

2007

On the use of immobilized metal complex catalysts in organic synthesis

Jones, C. W., Holbach, M., Richardson, J. M., Sommer, W. J., Weck, M., Yu, K. & Zheng, X., 2007, Catalysis of organic reactions. Schmidt, S. R. (ed.). Boca Raton, London, New York: CRC Press, p. 3-12 ISBN 0-8493-7557-6

Research output: Chapter in Book/Report/Conference proceedingChapter (peer-reviewed)

2005

Protein secondary structure mimetics as modulators of protein-protein and protein-ligand interactions

Hamilton, A., 2005, First reference of chemical biology. Schreiber, S., Kapoor, T. & Wess, G. (eds.). Wiley-VCH

Research output: Chapter in Book/Report/Conference proceedingChapter (peer-reviewed)

2004

DNA nanostructures for mechanics and computing: Nonlinear thinking with life's central molecule

Seeman, N., 2004, NanoBiotechnology. Mirkin, C. & Niemeyer, C. (eds.). Weinheim: Wiley-VCH Verlag GmbH, p. 308-318 Chapter 20

Research output: Chapter in Book/Report/Conference proceedingChapter (peer-reviewed)

DNA nanotechnology

Seeman, N., 2004, Encyclopedia of supramolecular chemistry. New York: Marcel Dekker, p. 475-483

Research output: Chapter in Book/Report/Conference proceedingChapter (peer-reviewed)

Optical consequences of dynamic processes at crystal inferfaces

Kahr, B., Kurimoto, M., Kaminsky, W., Jang, S. H. & Benedict, J., 2004, Nanocale structure and assembly of solid-fluid interfaces. Liu, X. Y. & De Yoreo, J. (eds.). Kluwer, Dordrecht

Research output: Chapter in Book/Report/Conference proceedingChapter (peer-reviewed)

Theoretical dynamics treatment of chemical reactions

Zhang, J., Li, Y. M., Wang, M. L. & Xiang, Y., 2004, Modern trends in chemical reaction dynamics, part I: Experiment and theory. Yang, X. & Liu, K. (eds.). Singapore: World Scientific Publishing, p. 209

Research output: Chapter in Book/Report/Conference proceedingChapter (peer-reviewed)

Versatile oligo(N-substituted) glycines: The many roles of peptoids in drug discovery

Patch, JA., Kirshenbaum, K., Seurynck, SL., Zuckermann, RN. & Barron, AE., 2004, Pseudo-peptides in drug development. Nielsen, PE. (ed.). Weinheim, Germany: Wiley-VCH, p. 1-31

Research output: Chapter in Book/Report/Conference proceedingChapter (peer-reviewed)

2003

Dipolar and scalar couplings in NMR of quadrupolar nuclei

Jerschow, A., 2003, Current developments in solid state NMR spectroscopy. Muller, N. & Madhu, PK. (eds.). Berlin: Springer, p. 1

Research output: Chapter in Book/Report/Conference proceedingChapter (peer-reviewed)

Fluorescence sensing of anions

Choi, K. & Hamilton, A., 2003, Encyclopedia of supramolecular chemistry. Atwood, J. L. & Steed, J. W. (eds.). Marcel Dekker

Research output: Chapter in Book/Report/Conference proceedingChapter (peer-reviewed)

2002

Ab initio qm/mm and free energy calculations of enzyme reactions

Zhang, Y., Liu, H. & Yang, W., 2002, Computational methods for macromolecules: Challenges and applications. Schlick, T. & Gan, H. H. (eds.). Springer Verlag, p. 332-354

Research output: Chapter in Book/Report/Conference proceedingChapter (peer-reviewed)

Organogelators: New supramolecular materials

Melendez, R. & Hamilton, A., 2002, Encyclopedia of smart materials. Biderman, A. (ed.). New York: Wiley, p. 472

Research output: Chapter in Book/Report/Conference proceedingChapter (peer-reviewed)

Supramolecular inversion of helical chirality

Holmes, A. E., Barcena, H. S. & Canary, J., 2002, Advances in supramolecular chemistry. Vol. 8. p. 43-78 Invited manuscript

Research output: Chapter in Book/Report/Conference proceedingChapter (peer-reviewed)

2001

Crystal optics and the symmetry principle: An update

Kaminsky, W. & Kahr, B., 2001, Symmetry 2000. Stockholm: Wenner-Gren Foundation, p. 309-316

Research output: Chapter in Book/Report/Conference proceedingChapter (peer-reviewed)

Intrasectoral zoning: Anisotropic organic materials

Gurney, R. W., Kurimoto, M., Subramony, J. A., Bastin, L. & Kahr, B., 2001, Approaches to polar order. Washington, DC: American Chemical Society, Vol. 789. p. 143-156 (ACS Symposium Series).

Research output: Chapter in Book/Report/Conference proceedingChapter (peer-reviewed)

Meso-scale self-assembly

Gracias, D. H., Choi, I. S., Weck, M. & Whitesides, G., 2001, New directions in algorithms and computational robotics. Donald, B., Lynch, K. & Rus, D. (eds.). A.K. Peters

Research output: Chapter in Book/Report/Conference proceedingChapter (peer-reviewed)

2000

Controlling hydrogen bonding: From molecular recognition to organogelation

Melendez, R., Carr, A. J., Linton, B. & Hamilton, A., 2000, Topics in Current Chemistry. Vol. 96. p. 31-61

Research output: Chapter in Book/Report/Conference proceedingChapter (peer-reviewed)

Crystal engineering with soft and topologically adaptable molecular host frameworks

Holman, K. T. & Ward, M., 2000, Stimulating concepts in chemistry. Vogtle, Stoddart & Shibasaki (eds.). Weinheim: Wiley-VCH, p. 221

Research output: Chapter in Book/Report/Conference proceedingChapter (peer-reviewed)

DNA nanotechnology: From topological control to structural control

Seeman, N., 2000, Pattern formation in biology, vision and dynamics. Carbone, A., Gromov, M. & Pruzinkiewicz, P. (eds.). Singapore: World Scientific Publishing, p. 271-309

Research output: Chapter in Book/Report/Conference proceedingChapter (peer-reviewed)

Farnesyltransferase and geranylgeranyltransferase I inhibitors as novel agents for cancer and cardiovascular diseases

Sebti, S. M. & Hamilton, A., 2000, Farnesyltransferase as a target in anti-cancer drug design. Sebti, S. M. & Hamilton, A. D. (eds.). Humana Press, p. 197

Research output: Chapter in Book/Report/Conference proceedingChapter (peer-reviewed)

Nicks, nodes, and new motifs for DNA nanotechnology

Seeman, N., Mao, C., Liu, F., Sha, R., Yang, X., Wenzler, L. A., Li, X., Shen, Z., Yan, H., Sa-Ardyen, P., Zhang, X., Shen, W., Birac, J. J., Lukeman, P. S., Pinto, Y., Qi, J., Liu, B., Qiu, H., Du, S. M., Wang, H. & 6 others, Sun, W., Wang, Y., Fu, T. J., Zhang, Y., Mueller, J. E. & Chen, J., 2000, Frontiers of nano-optoelectronic systems. Pavesi, L. & Buzanova, E. (eds.). Dordrecht: Kluwer, p. 177-198

Research output: Chapter in Book/Report/Conference proceedingChapter (peer-reviewed)

Peptidomimetic-based inhibitors of farnesyltransferase

Knowles, D. B., Rosenberg, S., Sebti, S. M. & Hamilton, A., 2000, Farnesyltransferase as a target in anti-cancer drug design. Sebti, S. M. & Hamilton, A. D. (eds.). Humana Press, p. 49

Research output: Chapter in Book/Report/Conference proceedingChapter (peer-reviewed)

Prenyltransferase inhibitors as radiosensitizers

Bernhard, E. J., Muschel, R. J., Cohen-Jonathan, E., Favre, G., Hamilton, A. & Sebti, S. M., 2000, Farnesyltransferase as a target in anti-cancer drug design. Hamilton, A. D. & Sebti, S. M. (eds.). Humana Press, p. 171

Research output: Chapter in Book/Report/Conference proceedingChapter (peer-reviewed)

Protein prenylation in trypanosomatids: A new piggy-back medicinal chemistry target for the development of agents against tropical diseases

Gelb, M. J., Buckner, F. S., Yokoyama, K., Ohkanda, J., Hamilton, A., Nguyen, L., Rossi-Bergmann, B., Stuart, K. D., Sebti, S. M. & Van Voorhis, W. C., 2000, Farnesyltransferase as a target in anti-cancer drug design. Sebti, S. M. & Hamilton, A. D. (eds.). Humana Press, p. 221

Research output: Chapter in Book/Report/Conference proceedingChapter (peer-reviewed)

Protein prenylation in trypanosomatids: A new piggy-back medicinal chemistry target for the development of agents against tropical diseases

Gelb, M. J., Buckner, F. S., Yokoyama, K., Ohkanda, J., Hamilton, A., Nguyen, L., Sebti, S. M. & Van Voorhis, W. C., 2000, Drugs against parasitic diseases. France, 2000

Research output: Chapter in Book/Report/Conference proceedingChapter (peer-reviewed)

Role of the peptide bond in protein structure and folding

Kallenbach, N., Bell, A. J. & Spek, E. J., 2000, The amide linkage. Greenberg, A., Breneman, C. M. & Liebman, J. F. (eds.). Wiley-Interscience, p. 599-625

Research output: Chapter in Book/Report/Conference proceedingChapter (peer-reviewed)

Visualization of chemical databases using the singular value decomposition and truncated-Newton minimalization

Xie, D. & Schlick, T., 2000, Optimization in computational chemistry and molecular biology: Local and global approaches. Floudas, C. A. & Pardalos, P. (eds.). Dordrecht, The Netherlands: Kluwer Academic Publishers, p. 267-286

Research output: Chapter in Book/Report/Conference proceedingChapter (peer-reviewed)

1999

Molecular recognition: Synthetic approaches to artificial receptors

Fan, E. & Hamilton, A., 1999, Crystal engineering. Seddon, K. & Zaworotko, M. (eds.). Kluwer, Vol. 539. p. 357-369

Research output: Chapter in Book/Report/Conference proceedingChapter (peer-reviewed)

Protein surface recognition

Salvatella, X., Haack, T., Gairí, M., De Mendoza, J., Peczuh, M. W., Hamilton, A. & Giralt, E., 1999, Protein surface recognition. Pons, M. (ed.). Kluwer, Vol. 526. p. 267-280

Research output: Chapter in Book/Report/Conference proceedingChapter (peer-reviewed)

Protein surface recognition by synthetic receptors

Lin, Q., Park, H. S., Hamuro, Y. & Hamilton, A., 1999, Supramolecular chemistry: Where it is and where it is going. Urgaro, R. (ed.). Amsterdam: Kluwer, Vol. 527. p. 197-204

Research output: Chapter in Book/Report/Conference proceedingChapter (peer-reviewed)

Self-assembling structures based on hydrogen bonding subunits

Zafar, A. & Hamilton, A., 1999, Problems in the synthesis and characterization of large molecular assemblies. Tsoucaris, G. (ed.). Kluwer, p. 67-85

Research output: Chapter in Book/Report/Conference proceedingChapter (peer-reviewed)

Structures, vibrational frequency shifts and photodissociation dynamics of ArnHF clusters

Bacic, Z., 1999, Theory of atomic and molecular clusters. Jellinek, J. (ed.). Berlin: Springer , p. 54-85

Research output: Chapter in Book/Report/Conference proceedingChapter (peer-reviewed)

Surfactant enhanced spreading

Stoebe, T., Hill, R. M., Ward, M., Scriven, LE. & Davis, H. T., 1999, Silicone surfactants. Hill, RM. (ed.). New York: Marcel Dekker, (Surfactant Science Series; vol. 86).

Research output: Chapter in Book/Report/Conference proceedingChapter (peer-reviewed)

Synthetic DNA topology

Seeman, N., 1999, Molecular catenanes, rotaxanes and knots. Sauvage, J-P. & Dietrich-Buchecker, C. (eds.). Weinheim: Wiley-VCH, p. 323-356

Research output: Chapter in Book/Report/Conference proceedingChapter (peer-reviewed)

Towards artificial antibodies: Protein surface recognition by synthetic receptors

Hamilton, A., Park, H. S., Lin, Q. & Jain, R., 1999, Peptides for the new millenium. Fields, G. B. & Tam, J. P. (eds.). Dordrecht: Kluwer, p. 531

Research output: Chapter in Book/Report/Conference proceedingChapter (peer-reviewed)

1998

A bottom-up approach to nanotechnology using DNA

Seeman, N., Chen, J., Zhang, Y., Liu, B., Qiu, H., Fu, T. J., Wang, Y., Li, X., Yang, X., Qi, J., Liu, F., Wenzler, L. A., Du, S. M., Mueller, J. E., Wang, H., Mao, C., Sun, W., Shen, Z., Wong, M. H., Yan, H. & 1 others, Sha, R., 1998, Biological molecules in nanotechnology. Lee, S. C. (ed.). Southborough, MA: IBC Libraries, p. 45-58

Research output: Chapter in Book/Report/Conference proceedingChapter (peer-reviewed)

DNA nanotechnology

Seeman, N., 1998, WTEC workshop report on R & D status and trends in nanoparticles, nanostructured materials, and nanodevices in the United States. Siegel, R. W., Hu, E. & Roco, M. C. (eds.). Baltimore: International Technology Research Institute, http://itri.loyola.edu/nano/us_r_n_d/09_04.htm

Research output: Chapter in Book/Report/Conference proceedingChapter (peer-reviewed)

Geometry optimization

Schlick, T., 1998, Encyclopedia of computational chemistry. von Rague Schleyer, P., Allinger, N. L., Clark, T., Gasteiger, J., Kollman, P. A. & Schaefer III, H. F. (eds.). West Sussex: John Wiley and Sons, Vol. 2. p. 1136-1157

Research output: Chapter in Book/Report/Conference proceedingChapter (peer-reviewed)

Hydrogen-bonded ribbons, tapes and sheets as motifs for crystal engineering

Melendez, R. & Hamilton, A., 1998, Design of organic solids. p. 97-129 doi: 10.1007/3-540-69178-2_3. (Topics in Current Chemistry; vol. 198).

Research output: Chapter in Book/Report/Conference proceedingChapter (peer-reviewed)